gh_get_transformations.Rd
Return a list of all the transformations or a transformation in a GatingHierarchy
gh_get_transformations( x, channel = NULL, inverse = FALSE, only.function = TRUE, ... )
x  A 

channel 

inverse 

only.function 

...  other arguments
equal.spaced 
lists of functions(or transform objects when only.function is FALSE), with each element of the list representing a transformation applied to a specific channel/parameter of a sample.
Returns a list of the transformations or a transformation in the flowJo workspace.
The list is of length L
, where L
is the number of distinct transformations applied to samples
in the flowjo_workspace
. Each element of L
is itself a list
of length M
,
where M
is the number of parameters that were transformed for a sample or group of samples
in a flowjo_workspace
. For example, if a sample has 10 parameters, and 5 are transformed during analysis,
using two different sets of transformations, then L will be of length 2, and each element of L will be of length 5.
The elements of L
represent channel or parameterspecific transformation functions that map from raw intensity values
to channelspace used by flowJo.
if (FALSE) { #Assume gh is a GatingHierarchy gh_get_transformations(gh); # return a list transformation functions gh_get_transformations(gh, inverse = TRUE); # return a list inverse transformation functions gh_get_transformations(gh, channel = "FL1H") # only return the transfromation associated with given channel gh_get_transformations(gh, channel = "FL1H", only.function = FALSE) # return the entire transform object }