Function reference • CytoML

FlowJo Workspaces Methods for converting between FlowJo workspaces and cytoverse `GatingSet` objects
`flowjo_workspace-class`	An R representation of a flowJo workspace.
`open_flowjo_xml()`	Open/Close a flowJo workspace
`parseWorkspace()` `flowjo_to_gatingset()`	Parse a flowJo Workspace
`gatingset_to_flowjo()`	Convert a GatingSet to flowJo workspace
`fj_ws_get_sample_groups()`	Get a table of sample groups from a flowJo workspace
`fj_ws_get_samples()`	Get a list of samples from a flowJo workspace
`fj_ws_get_keywords()`	Get Keywords
Diva Workspaces Methods for converting between BD FACSDiva workspaces and cytoverse `GatingSet` objects
`diva_workspace-class`	An R representation of a BD FACSDiva workspace
`open_diva_xml()`	open Diva xml workspace
`diva_to_gatingset()`	Parse a FACSDiva Workspace
`diva_get_samples()` `diva_get_sample_groups()`	Get a table of samples from a FACSDiva workspace
Cytobank Experiments Methods for converting between Cytobank experiments and cytoverse `GatingSet` objects
`open_cytobank_experiment()`	Construct a `cytobank_experiment` object from ACS file
`cytobank_to_gatingset(<default>)` `cytobank_to_gatingset(<cytobank_experiment>)`	A wrapper that parses the gatingML and FCS files (or `cytobank_experiment` object) into GatingSet
`gatingset_to_cytobank()`	Convert a GatingSet to a Cytobank-compatible gatingML
`ce_get_samples()`	Obtain a mapping between the samples and marker panels in a Cytobank experiment
`ce_get_compensations()`	Obtain the spillover matrices for the samples in a Cytobank experiment
`ce_get_transformations()`	Obtain the transformations associated with each channel in a Cytobank experiment